203 research outputs found
Lethal and Sublethal Effects of Novel Terrestrial Subsidies from an Invasive Shrub (Lonicera maackii) on Stream Macroinvertebrates
The biology of headwater streams is intimately linked to that of the surrounding terrestrial environment through organic matter subsidies. Lonicera maackii, an invasive shrub that is becoming abundant in headwater stream riparian areas, deposits substantial quantities of organic matter into the aquatic system. This organic material has allelopathic effects on terrestrial plants and insects, and a growing body of work suggests strong connections between L. maackii invasion and aquatic biota. Lonicera maackii deposits fruit and flowers in quantities and timings that are unique, and we tested the hypothesis that these subsidies would negatively affect survival and growth of laboratory-cultured Hyalella azteca and field-collected Anthopotamus verticis and Allocapnia spp. Invertebrates were exposed to a gradient of fruit (reference sediment + 0, 0.31, 0.62, 1.25, or 2.5 g dry mass [DM]) and flower (reference sediment + 0, 0.30, 0.60, 1.2, or 2.4 g DM) biomass in laboratory and field sediment exposure tests. Hyalella azteca survival was significantly reduced by exposure to L. maackii fruit in the laboratory and in the field exposures, and a negative effect was observed for A. verticis (p\u3c 0.05). Lonicera maackii flower biomass was associated with negative effects on survival of H. azteca in the field and laboratory exposures and of A. verticis in the laboratory exposure. During the laboratory exposures, dissolved O2 (DO) and pH were /L and 5.5, respectively. In the field exposures, DO and pH were comparable to stream conditions during fruit exposures, declining significantly with increasing flower biomass. Our results suggest that L. maackii fruit and flowers, novel subsidies in these systems, can negatively affect benthic organism survival and growth. Research focused on verifying this novel subsidy hypothesis for L. maackii and other species could enhance our understanding of invasion biology and terrestrialâaquatic linkages
Magnetism and unconventional superconductivity in CeMIn heavy-fermion crystals
We review magnetic, superconducting and non-Fermi-liquid properties of the
structurally layered heavy-fermion compounds CeMIn (M=Co, Rh,
Ir). These properties suggest d-wave superconductivity and proximity to an
antiferromagetic quantum-critical point.Comment: submitted 23rd International Conference on Low Temperature Physics
(LT-23), Aug. 200
The Bivariate Normal Copula
We collect well known and less known facts about the bivariate normal
distribution and translate them into copula language. In addition, we prove a
very general formula for the bivariate normal copula, we compute Gini's gamma,
and we provide improved bounds and approximations on the diagonal.Comment: 24 page
Response of the Heavy-Fermion Superconductor CeCoIn to Pressure: Roles of Dimensionality and Proximity to a Quantum-Critical Point
We report measurements of the pressure-dependent superconducting transition
temperature and electrical resistivity of the heavy-fermion compound
CeCoIn. Pressure moves CeCoIn away from its proximity to a
quantum-critical point at atmospheric pressure. Experimental results are
qualitatively consistent with theoretical predictions for strong-coupled,
d-wave superconductivity in an anisotropic 3D superconductor.Comment: 9 pages, 5 figure
HopScotch - a low-power renewable energy base station network for rural broadband access
The provision of adequate broadband access to communities in sparsely populated rural areas has in the past been severely restricted. In this paper, we present a wireless broadband access test bed running in the Scottish Highlands and Islands which is based on a relay network of low-power base stations. Base stations are powered by a combination of renewable sources creating a low cost and scalable solution suitable for community ownership. The use of the 5~GHz bands allows the network to offer large data rates and the testing of ultra high frequency ``white space'' bands allow expansive coverage whilst reducing the number of base stations or required transmission power. We argue that the reliance on renewable power and the intelligent use of frequency bands makes this approach an economic green radio technology which can address the problem of rural broadband access
CeIrGe: a local moment antiferromagnetic metal with extremely low ordering temperature
CeIrGe is an antiferromagnetic metal with a remarkably low ordering
temperature = 0.63 K, while most Ce-based magnets order between 2
and 15 K. Thermodynamic and transport properties as a function of magnetic
field or pressure do not show signatures of Kondo correlations, interaction
competition, or frustration, as had been observed in a few antiferromagnets
with comparably low or lower . The averaged Weiss temperature
measured below 10 K is comparable to suggesting that the RKKY
exchange coupling is very weak in this material. The unusually low
in CeIrGe can therefore be attributed to the large Ce-Ce bond length of
about 5.7 {\AA}, which is about 1.5 {\AA} larger than in the most Ce-based
intermetallic systems.Comment: 4 figure
Optimal treatment allocations in space and time for on-line control of an emerging infectious disease
A key component in controlling the spread of an epidemic is deciding where, whenand to whom to apply an intervention.We develop a framework for using data to informthese decisionsin realtime.We formalize a treatment allocation strategy as a sequence of functions, oneper treatment period, that map up-to-date information on the spread of an infectious diseaseto a subset of locations where treatment should be allocated. An optimal allocation strategyoptimizes some cumulative outcome, e.g. the number of uninfected locations, the geographicfootprint of the disease or the cost of the epidemic. Estimation of an optimal allocation strategyfor an emerging infectious disease is challenging because spatial proximity induces interferencebetween locations, the number of possible allocations is exponential in the number oflocations, and because disease dynamics and intervention effectiveness are unknown at outbreak.We derive a Bayesian on-line estimator of the optimal allocation strategy that combinessimulationâoptimization with Thompson sampling.The estimator proposed performs favourablyin simulation experiments. This work is motivated by and illustrated using data on the spread ofwhite nose syndrome, which is a highly fatal infectious disease devastating bat populations inNorth America
Recon 2.2: from reconstruction to model of human metabolism.
IntroductionThe human genome-scale metabolic reconstruction details all known metabolic reactions occurring in humans, and thereby holds substantial promise for studying complex diseases and phenotypes. Capturing the whole human metabolic reconstruction is an on-going task and since the last community effort generated a consensus reconstruction, several updates have been developed.ObjectivesWe report a new consensus version, Recon 2.2, which integrates various alternative versions with significant additional updates. In addition to re-establishing a consensus reconstruction, further key objectives included providing more comprehensive annotation of metabolites and genes, ensuring full mass and charge balance in all reactions, and developing a model that correctly predicts ATP production on a range of carbon sources.MethodsRecon 2.2 has been developed through a combination of manual curation and automated error checking. Specific and significant manual updates include a respecification of fatty acid metabolism, oxidative phosphorylation and a coupling of the electron transport chain to ATP synthase activity. All metabolites have definitive chemical formulae and charges specified, and these are used to ensure full mass and charge reaction balancing through an automated linear programming approach. Additionally, improved integration with transcriptomics and proteomics data has been facilitated with the updated curation of relationships between genes, proteins and reactions.ResultsRecon 2.2 now represents the most predictive model of human metabolism to date as demonstrated here. Extensive manual curation has increased the reconstruction size to 5324 metabolites, 7785 reactions and 1675 associated genes, which now are mapped to a single standard. The focus upon mass and charge balancing of all reactions, along with better representation of energy generation, has produced a flux model that correctly predicts ATP yield on different carbon sources.ConclusionThrough these updates we have achieved the most complete and best annotated consensus human metabolic reconstruction available, thereby increasing the ability of this resource to provide novel insights into normal and disease states in human. The model is freely available from the Biomodels database (http://identifiers.org/biomodels.db/MODEL1603150001)
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